Jan - Data Analyst PYTHON
Ref : 190618D001-
80080 AMIENS
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Développeur, Data Scientist, Data Analyst (54 ans)
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Freelance
Background
As a scientific engineer, my main interests has been genetics and infogenomics. More info is available at
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Bioinformatics engineer
12/2018- UR AgroImpact
INRA – Monsgenomes comparisons, enrichment analysis python, R, freewares ( … ) INRA (Versailles),
ICV (Lille)
12/2015-11/2018
CRRBM – UPJV
Amiens de novo assembly, DE analysis python, R, freewares (abyss, transabyss, InterProScan, ..)
UTC (Compiègne), GIE LINEA
06/2015-11/2015
IBPC – CNRS
Paris de novo assembly bash, python, R, freewares (abyss, PacBio softs, ..)
09/2012-05/2015
IBENS – CNRS
Paris DE analysis, genomes comparisons bash, python, R, freewares (bedtools, Jbrowse, ..) AgroParisTech
09/2011-08/2012
MIS lab. – UPJV
Amiens de novo assembly bash, freewares (edena, abyss, ..)
Molecular biology engineer
02/1993-08/2011
IJPB – INRA
Versailles molecular cloning, PCR, etc.
Single-molecule PCR, long range PCR, ...
University of Birmingham
Skills
I got an academic education, before and all along my career. My assignments allowed me to deal
with increasing amounts of biological data. Then, I got the the chance to develop strong skills in
IT and turned to bioinformatics and data analysis in general.
●Technical
● Informatics / computer science
●System setup and maintenance : Linux [4], Windows [1], MacOS [1].
●Programming langages / APIs : Bash [4], Python[4], R [4], PERL [2], PHP [2], JavaScript
[2], C [2], Java [2].
●Data storage and retrieval [3] : SQL, XML, JSON, HDF.
●Web managment : Apache [3], Tomcat [2].
●Statistics
●Descriptive statistics & statistical inference [3].
●Multivariate statistics [3], GLM [2], unsupervised learning [2].
●Relationnal
●Team playing [4], autonomy [4], initiative [4], organisation [4].
●Team managment [2].
1 : basic notions … 5 : expert knowledge
Education
● 2015/06 Master degree level in bioinformatics, University of Rouen
● 2010/06 PhD in biology, University Paris-XI.
● Juillet 1998 Master degree in cell molecular physiology, University Paris-XI.